Anorectal Malformation in children – causes, symptoms & treatment in Malaysia

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Dr Nada Sudhakaran

Paediatric Surgeon & Urologist

Anorectal Malformation in children – causes, symptoms & treatment in Malaysia

Before we start understanding Anorectal Malformation in Children in Malaysia, let us examine the part of the body affected by ANO-RECTAL Malformation

ANO- stand for the anus – this is the opening at the bottom end of the large intestine. Stool comes out through here when there is a bowel movement. -RECTAL means the rectum, this is the part of the large intestine just above the anus.

Anorectal Malformation
The Anus & Rectum

During normal bowel movement, stool passes from the large intestine to the rectum and then through the anus. Muscles in the anal area help to control when you have a bowel movement and nerves in the area help the muscles sense the need for a bowel movement and also contract and relax the muscle of the anus.

There should be individual episodes of bowel opening when the anal musculature relaxes and the bowel muscles contracts and expels the faeces. Till the next episode, they often remain clean

What is Anorectal Malformation?

Anorectal Malformation (ARM) is a birth abnormality to the bottom end of the intestinal tract where the opening is inadequate or in the wrong position. There are different forms of this anomaly for girls and boys. In some there is an abnormal opening that’s visible where there may be faeces coming out of and in others there are no visible opening at the bottom.

Here are some simplified drawings of the varieties of ARM in boys and in girls

What causes Anorectal Malformation (ARM)?

It is thought that the urinary system and the bowel tract opened into one common opening during the early developing human, during the early part of pregnancy. It then separates to the urinary system in front and the rectum/anus at the back. Failure of this separation process to happen may lead to an abnormality as to where the rectum opens.

Anorectal malformations occur in around 1 in 5,000 babies.

They are slightly more common in males. Most babies with ARM do not have a family history of this. There is however a strong association of ARM with children born with Downs Syndrome.

What are the symptoms of Anorectal Malformation

Common symptoms of ARM are:

Lack of stool

Stool coming from the vagina

Stool in the urine

Urine coming from the anus

Trouble having a bowel movement, or constipation

What are the common forms of Anorectal Malformation?

Recto vestibular fistula (girls)

The commonest form of ARM in girls are the recto-vestibular fistula where the rectum opens at the opening of the vagina (not within the vagina). Here we should be able to see the opening of the rectum and faeces can usually be passed.

Recto-vestibular fistula in a girl: where the rectal opening is usually seen at the outer vaginal opening.

Recto-Urethral fistula (boys)

In boys the commonest anomaly is a recto urethral fistula, where the rectum is connected to the urethra or urinary tract that is a tube between the bladder to the tip of the penis. Here there are no rectal/anal openings seen and the child will usually need a stoma  formed so the baby can feed and defecate.

The left is a fistula at the prostate part of the urethra and the right, the fistula is further along in the urethra

Perineal fistula (boys and girls)

This is not an obvious form of ARM. However, symptoms that may be apparent early on are: straining to open bowels which happens frequently day or night, abdominal distention, vomiting, poor feeding, constant faecal soiling on the bottom or nappy, breakdown of skin or constipation or obstruction with inability to pass any faeces for a few days in a row. For some, they may not have any symptoms, especially whilst exclusively on breast milk feeds.

Perineal fistula in girls: opening between the vagina and
just outside the muscle of the anus
Perineal fistula in boys: notice the opening is just slightly forward from where it should be and not through the anal muscle tunnel.
An ARM without a fistula – often a more severe form with other associated issues such as with the spine/sacrum, bladder or kidneys or with the heart.

Examination & Diagnosis of Anorectal Malformation

Your child’s surgeon will examine your child and assess if there is a problem. Investigations may be necessary to work out a diagnosis.

Your child may also have tests such as: 

  • Abdominal X-rays. This test images bones (spine and pelvis) and may give likely position of the rectum.
  • Abdominal ultrasound.  To see soft tissues like the bladder, kidneys and spinal cord.
  • Lower GI contrast study. X ray “dye” liquid is placed into the rectum so that they will show up on an X-ray. This is to work out the structure and anatomy of lower bowel.
  • Echo cardiogram. A special “ultrasound” of the heart is done to look at its structure and function.

For good bowel functioning, there should be no abnormal kinks or acute bends in the bowel and the rectum should open into the anal canal within the muscle sphincter complex. Hence a smooth passage of faeces and evacuation that can be controlled by the muscle voluntarily. In treating this condition, the rectum will be straightened out if required and should pass through the muscle for control of continence.

Treatment of Anorectal Malformation

Treatment will depend on your child’s symptoms, age, and general health. It will also depend on how severe the condition is. Most babies with an anorectal malformation will need to have surgery to correct the problem.

The type and number of surgeries your child needs will vary depending on the type of problem the child has. These surgeries may include:

Colostomy (stoma)

Some surgeons prefer colostomies, or stoma, for most type of ARM to protect the reconstructive repair from faeces. My preference are for colostomies for ARMs where there are no visible openings. If adequate faeces continues to be expelled without a stoma, this can go on till the definitive surgery is done.

With a colostomy, the large intestine is brought through openings on the tummy. The upper end of the opening of the large intestine (divided into two) lets stool out into a collection bag. The other end lets mucus made by the intestine to pass into the collection bag. This allows your child to grow before the next surgery.

Baby with a stoma and bag

Reconstructive surgery: Attaching the rectum to the anus

This surgery is often done in the first few months of life. The colostomies stay in place for a few months after this surgery. This is so the area can heal without being infected by stool. The rectum and anus are now joined with this procedure.

For most boys, keyhole surgery procedure is best, to avoid painful large cuts at the bottom.

For most girls, the abnormal opening is usually visible so detaching this rectum from an abnormal position and tunnelling it through the muscle to create the new anus can be done via a small incision at the bottom.

A few weeks after surgery, you may be doing anal dilations to prevent the newly created opening from narrowing.

Closing the colostomy

This surgery is done about 2 to 3 months later.

Several days after surgery, your child will start passing stools through the new rectum/anus. At first, stools will be frequent and loose. Diaper rash and skin irritation is a common problem at this stage. However, a few weeks after surgery, the stools frequency is less often and are more solid.

To avoid your child from then becoming constipated, a high-fibre diet and laxatives are usually prescribed.

Recovery & Bowel Management of Anorectal Malformation

The initial task after the surgeries is to prevent constipation. Your doctor will monitor your child regularly to ensure there are no issues with constipation and that your child is developing continence.

Each type of ARM has unique characteristics and it effects each child differently. Whether a child has any problems depends a great deal on the type of ARM the child has and they generally gain bowel control more slowly than children who do not.

The first few years may bring a few challenges but keeping a good communication with your surgeon is key to avoiding any serious issues and when managed well, it avoids any long term psychological issues with your child, related to his or her “bottom”.

Parent Testimonial of Anorectal Malformation Treatment by Dr Nada

“When my son was born in 2013, the doctor found that his anus was different from other children. He needed to do surgery immediately so that he can defecate normally, and this surgery required huge medical fee that I couldn’t afford. I was worried and afraid.

I decided to send my son to Hospital University Malaya. That was the first time I met Prof Nada. He explained in detailed to me that my son needed 3 surgeries.

The first operation was to put the stoma bag to allow him to poo. The second was to create a new anus and the third surgery is to close the stoma. I was worried and fearful every time when my son underwent surgery, but every time when Dr Nada finished the surgery he came out to comfort me.

He is patient , humble and affable doctor. He always has a smile on his face. Dr Nada saved my child and gave him a new life. Now my son is six years old, he has the same bowel movement as a normal child and healthy growth. Dr Nada is kind, professional, and an awesome, remarkable doctor. We are always grateful for everything he had done for my child.”

Ms Lau, mother

Dr Nada in the media with regards to Anorectal Malformation

The case of Lew Cheng Xin and how Da-Ai rallied Malaysian’s to raise RM66,000 for his urgent operation (23-06-2021)

“𝙃𝙞 𝘿𝙧 𝙉𝙖𝙙𝙖 𝙄 𝙟𝙪𝙨𝙩 𝙬𝙖𝙣𝙩 𝙩𝙤 𝙘𝙝𝙚𝙘𝙠 𝙩𝙝𝙚 𝙖𝙪𝙩𝙝𝙚𝙣𝙩𝙞𝙘𝙞𝙩𝙮 𝙤𝙛 𝙇𝙚𝙬 𝘾𝙝𝙚𝙣𝙜 𝙓𝙞𝙣’𝙨 𝙘𝙖𝙨𝙚 𝙖𝙣𝙙 𝙩𝙝𝙚 𝙘𝙧𝙤𝙬𝙙 𝙛𝙪𝙣𝙙𝙞𝙣𝙜 𝙗𝙮 𝘿𝙖 𝘼𝙞 – 𝙏𝙌”

We received a few such messages today from our community in regards to the case of Lew Cheng Xin, and his mother’s (Winnie Lew Qi Voon) appeal for help to cover his urgent surgical costs.

See the full story here and find out how you can help > https://www.facebook.com/DaaiMalaysia.PJ/posts/1186581051857384

The case was shared via DA-AI, a wonderful NGO that aims to help those in need with Social Crowdfunding.

The little boy, Cheng Xin is suffering from 𝗔𝗻𝗼𝗿𝗲𝗰𝘁𝗮𝗹 𝗠𝗮𝗹𝗳𝗼𝗿𝗺𝗮𝘁𝗶𝗼𝗻.

With the letter above, Dr Nada would like to re-assure the community that the case is indeed genuine and he is treating the brave little boy after Winnie brought him to see him.

For Cheng Xin’s sake and that of his mother, Winnie, we hope they get the help they desperately need so that we can focus on his urgent treatment and recovery.

Facebook Post 1: https://www.facebook.com/DrNadaSudhakaran/posts/522404325872459

Facebook Post 2: https://www.facebook.com/DrNadaSudhakaran/posts/525573878888837


Article Published in Easily Sin Chew on 17-12-2020

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We are truly blessed to have found such a brilliant and surgeon. Highly recommendedHelen YaoHelen Yao ★★★★★ Dr. Nada is a very kind and patient doctor. My 10-year-old son went to the emergency department with abdominal pain and had difficulty describing what he was feeling. Dr. Nada was excellent at guiding him to express his pain clearly. We highly recommend Dr. Nada to other parents.Hazwan MustafaHazwan Mustafa ★★★★★ Experienced. Making wise and fast suggestions to us. Thank you Dr.Ben ben baliBen ben bali ★★★★★ Dr Nada's explanation is very clear and answers our questions one by one. He is very Kind and expert, the operation is a success and the child after the operation can walk without feeling too much pain. Thank You Doctor Nada🙏🏻😊👍👍IENA AZLINAIENA AZLINA ★★★★★ Heartfelt thanks to Dr. Nada for his gentle care and reassurance throughout my daughter’s appendix surgery. 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Looking back, I wish we had done this much earlier when my baby was under a month old—it would have made my breastfeeding journey so much smoother.After the release, we immediately noticed a big difference. My baby feeds much better now, drinking milk from the bottle is easier, and swallowing solids has also improved within a few days. I’m also hopeful to see her relatch soon.Thank you, Dr. Nada, for guiding us through this journey and for your genuine care. I highly recommend Dr. Nada and his clinic to any parent considering a tongue tie release for their baby.Siti AnisdaSiti Anisda ★★★★★ Dear Dr. Nada, Dr Chong, Assunta Team and Pantai Team,I and husband just wanted to extend our sincere gratitude for the excellent care you provided during my son's tongue-tie procedure on 23 September 2025. Your professionalism, kindness, and reassuring approach made a world of difference during what could have been a stressful time for us.Thank you for making both my son and us as parents feel comfortable and well taken care of. We truly appreciate your expertise and compassion.♥️♥️♥️Nichole TanNichole Tan ★★★★★ Doctor very good 👍👍👍VIVEK SASHEENDRANVIVEK SASHEENDRAN ★★★★★ I had a very pleasant experience with Dr Nada. Special needs son had an emergency due to an infection In the gut.Direshkumar PadmanathanDireshkumar Padmanathan ★★★★★ Dr. Nada is very good at handling kids and always very helpful. He makes children feel comfortable and explains things clearly to parents. Highly recommended!koduru lokeshkoduru lokesh ★★★★★ Our experience with Dr Nada was excellent, He was the best person person to treat our child. We are always thankful to Dr Nada.Zurina JusohZurina Jusoh ★★★★★ senang berurusan dgn Dr Nada, anak saya berusia 3,4 hari yang baru dilahirkan terpaksa/ wajib buat operation ESOPHAGEAL ATRESIA SURGERY.penerangan sebelum dan selepas operation dari Doctor sangat meyakinkan kami.skrg anak sudah berusia 4 tahun. alhamdulillahlah sihat. 👍👍👍terima kasih doc. doc membuat kerja dgn cemerlang💪👌👌Vivian YapVivian Yap ★★★★★ Awesome doctor and he’s super good with kidsjs_loader

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